School, Program, and Course Information

  • 7/15 Virtual Genome Assembly Workshop 7/15-18

    Virtual Workshop: Genome Assembly

    • July 15-18, 2024 ~ 10:00 AM - 1:00 PM EST
    • $400 UConn affiliate, $500 external participant
    • Live sessions on zoom, recordings distributed 
    • No prior bioinformatics experience needed!
    • Visit https://bioinformatics.uconn.edu/cbc-workshops/ to register

    Workshop details:

    • Acquire foundational knowledge in Linux and familiarize yourself with navigating High Performance Computing (HPC) environments.
    • Explore the principles of Genome Assemblies with illumina, PacBio, and ONT data.
    • Walk through download and quality control of sequence data, genome size estimation, assembly, polishing, scaffolding, and QC.
    • Learn how to use popular software in the genome assembly space, such as jellyfish, MaSuRCA, Hifiasm, Flye, Merqury, gce, and more.
    For more information, contact: Computational Biology Core at cbcsupport@helpspotmail.com